Jobs

From European Proteomics Academy
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This page is a collection of job advertisements focused on people with bioinformatics expertise. To post a job, simply edit this page, see instructions below.

Academia

Position Category Country City Institute Description Expiring date Contact Link
PostDoc Bioinformatics / Computational Biology Germany Hohenheim University of Hohenheim Currently, the CFH consists of three modules: Analytical Chemistry, Mass Spectrometry, and Spectroscopy, providing high-throughput technologies particularly in the areas of Proteomics (MS), Metabolomics (MS/NMR) and Ionomics (ICP-MS, ICP-AES).

In the frame of a DFG-funded project, the newly created unit “Data Management and Bioinformatics” aims to facilitate and drive the exploration of connections and correlations between data obtained by different analytical techniques. In particular, the goals are to implement a common data storage and exchange system for the currently existing CFH modules, to find means for integrated data analysis of multi-omics datasets and to support and train CFH users in experimental design and (statistical) data analysis.

2017-04-15 cfh@uni­hohenheim.de job offer
Staff Scientist Bioinformatics / Computational Biology Germany Hohenheim University of Hohenheim Currently, the CFH consists of three modules: Analytical Chemistry, Mass Spectrometry, and Spectroscopy, providing high-throughput technologies particularly in the areas of Proteomics (MS), Metabolomics (MS/NMR) and Ionomics (ICP-MS, ICP-AES).

In the frame of a DFG-funded project, the newly created unit “Data Management and Bioinformatics” aims to facilitate and drive the exploration of connections and correlations between data obtained by different analytical techniques. In particular, the goals are to implement a common data storage and exchange system for the currently existing CFH modules, to find means for integrated data analysis of multi-omics datasets and to support and train CFH users in experimental design and (statistical) data analysis.

2017-04-15 cfh@uni­hohenheim.de job offer
PostDoc Spectroscopy / Chemometrics Austria/ Switzerland Vienna/ Zurich Vetmed Vienna/ Uni Zurich Successful translation and implementation of a tool for the differentiation of fresh from previously frozen meat based on chemometric-assisted FTIR spectroscopy from laboratory scale to a working prototype in the field.

We are looking for an applicant holding a PhD in chemometrics, bioinformatics or equivalent, with advanced skills in multivariate statistical analyses and modeling, including AI systems, such as neural networks, support vector machines etc. A background or interest in spectroscopy (FTIR, NIR, Raman, UV/Vis), as well as project management and advanced communication and writing skills in English are required.

2017-05-01 sophia.johler@uzh.ch/ tom.grunert@vetmeduni.ac.at
PostDoc Proteomics / Computational Biology Austria Salzburg Univ. of Salzburg A postdoctoral researcher position is available in theChristian Doppler Laboratory for Biosimilar Characterization at the University of Salzburg. The laboratory is a collaboration of five academic research groups and two industrial partners with a focus on therapeutic protein characterization. The candidate will set up experimental plans to systematically organize workflows, data collection and data storage, and interact with programmers of industrial collaborators to install and implement new software components, program suitable scripts and algorithms aiding data conversion and interpretation according to regulations of Good Manufacturing Practice. 2020-09 c.huber@sbg.ac.at job offer
PhD / staff scientist Bioinformatics / Proteomics Germany Bochum Ruhr-Universität Bochum The Medical Bioinformatics group of the Medizinisches Proteom-Center is looking for a bioinformatician, to adapt / improve scientific analysis software for cloud computing. For more information about the position, please see the posted link. 2018-02 martin.eisenacher@rub.de job offer
PhD / staff scientist Statistics Germany Bochum Ruhr-Universität Bochum The Medical Bioinformatics group of the Medizinisches Proteom-Center is looking for a statistician for the analysis of quantitative proteomics data. This includes the planning of the experiment and an adequate analysis method. For more information about the position, please see the posted link. 2018-12 martin.eisenacher@rub.de job offer

Industry

Position Category Country City Institute Description Expiring date Contact Link
Remote Part-Time Bioinformatician Proteomics Bioinformatics Anywhere Anywhere DeepDIA We are seeking a bioinformaticist for a few hours/week (as much as you are interested in devoting) to work from anywhere (with a decent internet connection) to help design, implement, and test truly sophisticated informatics algorithms for DIA informatics on Thermo Fusion/Lumos/QE and Sciex 5600/6600 instruments. The algorithms are absolutely state-of-the-art, and they are also running on state-of-the-art massively parallel computation infrastructure (think 100s of CPU cores), so it sometimes requires "a different way of thinking". We are currently 3 bioinformaticists plus 6 software engineers, all working from around the world. The work is exciting, paid, and can be part of your publication material or even current academic research (some aspects may be more confidential than others, but they are few and should not prevent publication.) The intention is that our work will be used by big pharma, government, and academia, and we already have ~6 different organizations collaborating with us presently that fall into those 3 categories.

Skills sought: strong CS background (either from school & or from years of experience); strong knowledge of proteomics informatics (ie you could rewrite a search engine as sophisticated as MaxQuant if you really had to etc.); Java; Linux etc.

Hours worked: A few of your hours worked should overlap with normal US East Coast business hours so that we can do team google hangouts easily etc.

2017-03-31 gautam.saxena@deepdia.com <none yet>
Staff scientist Computational Biology / Oncology Germany Cologne NEO New Oncology GmbH NEO New Oncology GmbH – part of Siemens Healthineers – is a dynamically growing diagnostics company offering genetic testing to identify optimal treatment options for cancer patients. Our technology platform “NEO” is based on next generation sequencing and proprietary computer algorithms. NEO reliably identifies therapy-relevant genetic alterations from standard clinical material such as FFPE specimens and liquid biopsies with short turnaround times and highest accuracy.

The Computational Biology department is seeking a highly motivated Computational Biologist (m/f) with strong track record in the field of bioinformatics and/or computational biology to strengthen the existing team of outstanding international scientists and computational biologists contributing to the improvement of the New Oncology cutting-edge technology.

jobs@newoncology.de job offer
Staff scientist Computational Biology / Bioinformatics / Oncology Germany Cologne NEO New Oncology GmbH NEO New Oncology GmbH – part of Siemens Healthineers – is a dynamically growing diagnostics company offering genetic testing to identify optimal treatment options for cancer patients. Our technology platform “NEO” is based on next generation sequencing and proprietary computer algorithms. NEO reliably identifies therapy-relevant genetic alterations from standard clinical material such as FFPE specimens and liquid biopsies with short turnaround times and highest accuracy.

The Computational Biology department is seeking a highly motivated Computational Biologist / Bioinformatician (m/f) with strong track record in the field of bioinformatics and/or computational biology to strengthen the existing team of outstanding international scientists and computational biologists contributing to the improvement of the New Oncology cutting-edge technology.

jobs@newoncology.de job offer

How to post a job

If you are interested in posting a job, simply register for this wiki and edit this page.

The fields in the table should be filled out according to these guidelines:

  • Position: PhD, PostDoc, Staff scientist, Group leader
  • Category: Use key words to help applicants see the field of application.
  • Country: Name of the country written out, e.g. Austria.
  • Institute: The institute's name.
  • Description: A very short description about the main requirements for this job and the main duties. This should not be a detailed job description but only a short summary.
  • Epiring date: The expiring date in the format YYYY-MM-DD. Expired announcements are moved to the Archive section.
  • Contact: Primary means of contact for this job offer.
  • Link: Link to the official job posting at your institute's website.

Archive

This section lists expired job offers.

  • Academia
Position Category Country City Institute Description Expiring date Contact Link
PostDoc Proteomics Denmark Odense University of Southern Denmark The research project entails the systems-level analysis of temporal abundance profiles of proteins and their post-translational modifications (PTMs, e.g. phosphorylation, acetylation). The candidate will develop algorithms and use computational and statistical tools to elucidate the molecular mechanisms and regulatory features that initiate and maintain specific cellular lineages. 2017-03-29 veits@bmb.sdu.dk [1]
PostDoc Systems Biology Germany Dortmund ISAS e.V. ISAS Dortmund seeks a talented and highly motivated computer scientist to pursue bioinformatics network analysis to elucidate novel signalling hubs in insulin resistance within the Leibnitz funded “A Synaptoneurolipidomics View on Neuronal Plasticity in Insulin Resistance and Alzheimer's disease” SAW project. 2017-01-27 personal@isas.de job offer
PostDoc Lipidomics Germany Dortmund ISAS e.V. ISAS Dortmund seeks a talented and highly motivated Bioinformation to pursue bioinformatics infrastructure projects in collaboration within the German Network for Bioinformatics-Infrastructure (de.NBI). The primary focus is the setup of lipidomics search engines and the provision of databases for targeted lipidomics in biomedical research. 2017-01-27 personal@isas.de job offer
PostDoc Genomics Norway Bergen University of Bergen The work is intended to identify novel genes and mechanisms involved in predisposition to abnormal growth, childhood obesity and diabetes. The candidates will mainly work with a unique GWAS and exome chip dataset of 11 000 mother-father-child trios from the population-based Mother and Child Cohort of Norway (MoBa). Tasks will involve associations based studies on genotype-phenotype relationships, application and development of methods for trio-analysis, imputation and rare-coding variant analysis and longitudinal analysis and epidemiology. 2017-03-27 stefan.johansson@uib.no job offer
Scientific Software Designer Infrastructure Denmark Odense University of Southern Denmark We are now looking for skilled software developers to create a pilot infrastructure for a research cloud service. One of the positions is reserved for a team leader for this project. The project involves the design and development of: a distributed cloud storage service for researchers; an interface to computing infrastructures, such as the national HPC center at SDU; a container system for scientific applications as a cloud computing service integrated with the cloud storage and HPC system. 2017-02-15 pica@cp3-origins.net job offer
PostDoc Proteomics France Grenoble CNRS Analyses of the phosphoproteome and of histone post-translational modifications (PTMs) by mass spectrometry, of chromatin re-organization by ATAC-sequencing, and of mRNA by RNA-sequencing will be performed on endothelial cells at different time points after application of extracellular vesicles produced by a cancer cell line. the recruited person will carry out bioinformatics analysis of each omics data independently. In proteomics, given the wealth of PTMs modifying histones described over the past ten years, a particular challenge consists of the interpretation of mass spectrometry (MS/MS) spectra by the establishment of a dedicated bioinformatics method. Transcriptomic data will be processed to quantify expression and to detect differentially expressed / spliced transcripts. Then, the recruited person will work on the integrated analysis of these multi-omics processed data to decipher target cell perturbations undergone after internalization of extracellular vesicles secreted by cancer cells. 2017-02-28 delphine.pflieger@cea.fr job offer
  • Industry
Position Category Country City Institute Description Expiring date Contact Link