Tutorials
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Here we try to present a list of useful tutorials that present the basic principles of proteomics technologies.
Contents
Internal Tutorials
These are tutorials created by us (or our collaborators) especially for this page:
- Introducing search engines (example of a search engine page is the MSAmanda page)
- Introducing distributed computing (example of a distributed computing page is the Pladipus page)
External Tutorials
Compomics Tutorials
The Computational Omics and Systems Biology Group at the VIB-UGent provide tutorials using user-friendly proteomics bioinformatics tools, most importantly SearchGUI and PeptideShaker.
The complete list of tutorials can be found at https://compomics.com/bioinformatics-for-proteomics/.
Currently, they offer three tutorials:
Skyline Tutorials
The Skyline wiki provides several tutorials on how to use the software.
The complete list can be found here
Online Video Tutorials
| Title | Category | Description |
|---|---|---|
| Pladipus | Intermediate / Advanced | Video tutorial on how to set a distributed computing system using Pladipus by Kenneth Verheggen. |
| Cross Linking | Intermediate / Advanced | Video tutorial on how to idenify cross linked peptides using ProteinProspector by Robert Chalkley. |
